With regards to making your pizza a little healthier, think of your nutrition as really made or busted in 2 places: the crust and the toppings. The following recipe will take care of a healthier crust for you, but what about the toppings? I would encourage you not to reach straight for the pepperoni and extra cheese. Instead, here are some healthy pizza toppings that you can try instead: Meat: Ham Turkey sausage Turkey pepperoni (they actually make turkey pepperoni – it’s actually really good!